Index

A

add_gene_density() (buscoplotpy.graphics.chromosome.Chromosome method)

add_label() (buscoplotpy.graphics.chromosome.Chromosome method) add_region() (buscoplotpy.graphics.chromosome.Chromosome method)

B

bezier_curve() (buscoplotpy.graphics.link.Link method) buscoplotpy module buscoplotpy.graphics module buscoplotpy.graphics.chromosome module buscoplotpy.graphics.karyoplot module buscoplotpy.graphics.label module buscoplotpy.graphics.link module

buscoplotpy.graphics.organism_busco_barplot module buscoplotpy.graphics.synteny module buscoplotpy.utils module buscoplotpy.utils.load_busco_fulltable module buscoplotpy.utils.load_json_summary module buscoplotpy.utils.load_metaeuk_coordinates module

C

Chromosome (class in buscoplotpy.graphics.chromosome)

G

generate_bottom_karyotype() (in module buscoplotpy.graphics.synteny) generate_left_karyotype() (in module buscoplotpy.graphics.synteny) generate_links() (in module buscoplotpy.graphics.synteny)

generate_right_karyotype() (in module buscoplotpy.graphics.synteny) generate_up_karyotype() (in module buscoplotpy.graphics.synteny) get_relative_position() (buscoplotpy.graphics.chromosome.Chromosome method)

H

horizontal_synteny_plot() (in module buscoplotpy.graphics.synteny)

K

karyoplot() (in module buscoplotpy.graphics.karyoplot)

L

Label (class in buscoplotpy.graphics.label) Link (class in buscoplotpy.graphics.link)

load_busco_fulltable() (in module buscoplotpy.utils.load_busco_fulltable) load_json_summary() (in module buscoplotpy.utils.load_json_summary) load_metaeuk_coordinates() (in module buscoplotpy.utils.load_metaeuk_coordinates)

M

module buscoplotpy buscoplotpy.graphics buscoplotpy.graphics.chromosome buscoplotpy.graphics.karyoplot buscoplotpy.graphics.label buscoplotpy.graphics.link buscoplotpy.graphics.organism_busco_barplot buscoplotpy.graphics.synteny buscoplotpy.utils buscoplotpy.utils.load_busco_fulltable buscoplotpy.utils.load_json_summary buscoplotpy.utils.load_metaeuk_coordinates

MyClass (class in buscoplotpy.utils)

O

organism_busco_barplot() (in module buscoplotpy.graphics.organism_busco_barplot)

P

plot() (buscoplotpy.graphics.chromosome.Chromosome method) (buscoplotpy.graphics.label.Label method) (buscoplotpy.graphics.link.Link method)

plot_chromosomes() (in module buscoplotpy.graphics.synteny) plot_links() (in module buscoplotpy.graphics.synteny)

V

vertical_synteny_plot() (in module buscoplotpy.graphics.synteny)